maxwelllink package

Subpackages

• maxwelllink.cavity package
  • BraggResonator
    • BraggResonator.__init__()
    • BraggResonator.allowed_bounds_nm
    • BraggResonator.emission_setup()
    • BraggResonator.estimate_driver_count()
    • BraggResonator.linear_spectrum()
    • BraggResonator.make_simulation()
    • BraggResonator.meep_to_nm()
    • BraggResonator.nm_to_meep()
    • BraggResonator.optical_setup()
    • BraggResonator.place_molecule()
    • BraggResonator.place_region()
    • BraggResonator.plot()
    • BraggResonator.purcell()
    • BraggResonator.sim_kwargs()
    • BraggResonator.summary()
  • DummyCavity
    • DummyCavity.__init__()
    • DummyCavity.allowed_bounds_nm
    • DummyCavity.emission_setup()
    • DummyCavity.estimate_driver_count()
    • DummyCavity.linear_spectrum()
    • DummyCavity.make_simulation()
    • DummyCavity.meep_to_nm()
    • DummyCavity.nm_to_meep()
    • DummyCavity.optical_setup()
    • DummyCavity.place_molecule()
    • DummyCavity.place_region()
    • DummyCavity.plot()
    • DummyCavity.purcell()
    • DummyCavity.sim_kwargs()
    • DummyCavity.summary()
  • NPoM
    • NPoM.__init__()
    • NPoM.allowed_bounds_nm
    • NPoM.emission_setup()
    • NPoM.estimate_driver_count()
    • NPoM.linear_spectrum()
    • NPoM.make_simulation()
    • NPoM.meep_to_nm()
    • NPoM.nm_to_meep()
    • NPoM.optical_setup()
    • NPoM.place_molecule()
    • NPoM.place_region()
    • NPoM.plot()
    • NPoM.purcell()
    • NPoM.sim_kwargs()
    • NPoM.summary()
  • PlasmonicRod
    • PlasmonicRod.__init__()
    • PlasmonicRod.allowed_bounds_nm
    • PlasmonicRod.emission_setup()
    • PlasmonicRod.estimate_driver_count()
    • PlasmonicRod.linear_spectrum()
    • PlasmonicRod.make_simulation()
    • PlasmonicRod.meep_to_nm()
    • PlasmonicRod.nm_to_meep()
    • PlasmonicRod.optical_setup()
    • PlasmonicRod.place_molecule()
    • PlasmonicRod.place_region()
    • PlasmonicRod.plot()
    • PlasmonicRod.purcell()
    • PlasmonicRod.sim_kwargs()
    • PlasmonicRod.summary()
  • Vacuum
    • Vacuum.__init__()
    • Vacuum.allowed_bounds_nm
    • Vacuum.emission_setup()
    • Vacuum.estimate_driver_count()
    • Vacuum.linear_spectrum()
    • Vacuum.make_simulation()
    • Vacuum.meep_to_nm()
    • Vacuum.nm_to_meep()
    • Vacuum.optical_setup()
    • Vacuum.place_molecule()
    • Vacuum.place_region()
    • Vacuum.plot()
    • Vacuum.purcell()
    • Vacuum.sim_kwargs()
    • Vacuum.summary()
  • Submodules
    • maxwelllink.cavity.bragg module
      • BraggResonator
    • maxwelllink.cavity.dummy_cavity module
      • DummyCavity
    • maxwelllink.cavity.npom module
      • NPoM
    • maxwelllink.cavity.rod module
      • PlasmonicRod
    • maxwelllink.cavity.vacuum module
      • Vacuum
• maxwelllink.cli package
  • Submodules
    • maxwelllink.cli.mxl module
      • main()
    • maxwelllink.cli.mxl_clean module
      • clean_workspace()
      • mxl_clean_main()
    • maxwelllink.cli.mxl_hpc module
      • ensure_default_hpc_profile()
      • mxl_hpc_main()
      • set_hpc_profile()
    • maxwelllink.cli.mxl_init module
      • initialize_workspace()
      • mxl_init_main()
• maxwelllink.em_solvers package
  • Submodules
    • maxwelllink.em_solvers.dummy_em module
      • DummyEMSimulation
      • DummyEMUnits
      • MoleculeDummyWrapper
    • maxwelllink.em_solvers.gridmd module
      • GridMDSimulation
    • maxwelllink.em_solvers.laser_driven module
      • LaserDrivenSimulation
      • LaserDrivenUnits
      • MoleculeLaserDrivenWrapper
    • maxwelllink.em_solvers.meep module
      • MeepSimulation
      • MeepUnits
      • MoleculeMeepWrapper
      • meep_units_helper()
      • update_molecules()
      • update_molecules_no_mpi()
      • update_molecules_no_socket()
    • maxwelllink.em_solvers.multimode_cavity module
      • FabryPerotCavity
      • MoleculeMultiModeWrapper
      • MultiModeSimulation
      • MultiModeUnits
    • maxwelllink.em_solvers.single_mode_cavity module
      • DummyThermostat
      • LangevinThermostat
      • MoleculeSingleModeWrapper
      • SingleModeSimulation
      • SingleModeUnits
• maxwelllink.measurements package
  • DummyMeasurement
    • DummyMeasurement.__init__()
    • DummyMeasurement.postprocess()
    • DummyMeasurement.reference()
    • DummyMeasurement.run()
    • DummyMeasurement.signal_run()
  • MeepCavityMeasurement
    • MeepCavityMeasurement.__init__()
    • MeepCavityMeasurement.decay_check_dt
    • MeepCavityMeasurement.postprocess()
    • MeepCavityMeasurement.reference()
    • MeepCavityMeasurement.run()
    • MeepCavityMeasurement.signal_run()
  • MeepPurcellSpectroscopy
    • MeepPurcellSpectroscopy.__init__()
    • MeepPurcellSpectroscopy.decay_check_dt
    • MeepPurcellSpectroscopy.postprocess()
    • MeepPurcellSpectroscopy.reference()
    • MeepPurcellSpectroscopy.run()
    • MeepPurcellSpectroscopy.signal_run()
  • MeepReflectionSpectroscopy
    • MeepReflectionSpectroscopy.__init__()
    • MeepReflectionSpectroscopy.decay_check_dt
    • MeepReflectionSpectroscopy.postprocess()
    • MeepReflectionSpectroscopy.reference()
    • MeepReflectionSpectroscopy.run()
    • MeepReflectionSpectroscopy.signal_run()
  • MeepScatteringSpectroscopy
    • MeepScatteringSpectroscopy.__init__()
    • MeepScatteringSpectroscopy.decay_check_dt
    • MeepScatteringSpectroscopy.postprocess()
    • MeepScatteringSpectroscopy.reference()
    • MeepScatteringSpectroscopy.run()
    • MeepScatteringSpectroscopy.signal_run()
  • MeepTransmissionSpectroscopy
    • MeepTransmissionSpectroscopy.__init__()
    • MeepTransmissionSpectroscopy.decay_check_dt
    • MeepTransmissionSpectroscopy.postprocess()
    • MeepTransmissionSpectroscopy.reference()
    • MeepTransmissionSpectroscopy.run()
    • MeepTransmissionSpectroscopy.signal_run()
  • Submodules
    • maxwelllink.measurements.dummy_measurement module
      • DummyMeasurement
    • maxwelllink.measurements.meep_linear module
      • MeepCavityMeasurement
      • MeepPurcellSpectroscopy
      • MeepReflectionSpectroscopy
      • MeepScatteringSpectroscopy
      • MeepTransmissionSpectroscopy
• maxwelllink.molecule package
  • Submodules
    • maxwelllink.molecule.molecule module
      • Molecule
      • Vector3
    • maxwelllink.molecule.molecule_legacy module
      • DummyMolecule
      • SocketMolecule
      • TLSMolecule
      • atomic_to_meep_units_SourceAmp()
      • make_custom_time_src()
      • meep_to_atomic_units_E()
      • reset_module_state()
      • update_molecules()
      • update_molecules_no_mpi()
      • update_molecules_no_socket()
• maxwelllink.mxl_drivers package
  • Subpackages
    • maxwelllink.mxl_drivers.lammps package
      • Submodules
    • maxwelllink.mxl_drivers.python package
      • Subpackages
      • Submodules
• maxwelllink.sockets package
  • AggregatedSocketHub
    • AggregatedSocketHub.__init__()
    • AggregatedSocketHub.add_bridge()
    • AggregatedSocketHub.all_bound()
    • AggregatedSocketHub.graceful_shutdown()
    • AggregatedSocketHub.init_remote_bridges()
    • AggregatedSocketHub.register_molecule()
    • AggregatedSocketHub.register_molecule_return_id()
    • AggregatedSocketHub.step_barrier()
    • AggregatedSocketHub.stop()
    • AggregatedSocketHub.wait_until_bound()
  • AggregatedSusceptibilitySocketHub
    • AggregatedSusceptibilitySocketHub.__init__()
    • AggregatedSusceptibilitySocketHub.bridge_command()
    • AggregatedSusceptibilitySocketHub.bridge_info
    • AggregatedSusceptibilitySocketHub.bridge_specs
    • AggregatedSusceptibilitySocketHub.driver_command_template()
    • AggregatedSusceptibilitySocketHub.init_remote_bridges()
    • AggregatedSusceptibilitySocketHub.lorentzian_conversion()
    • AggregatedSusceptibilitySocketHub.rank_stats
    • AggregatedSusceptibilitySocketHub.stop()
    • AggregatedSusceptibilitySocketHub.write_bridge_manifest()
  • LocalSocketHubBridge
    • LocalSocketHubBridge.__init__()
    • LocalSocketHubBridge.local_endpoint
    • LocalSocketHubBridge.run()
    • LocalSocketHubBridge.start()
    • LocalSocketHubBridge.stop()
  • RemoteBridgeSpec
    • RemoteBridgeSpec.__init__()
    • RemoteBridgeSpec.from_dict()
    • RemoteBridgeSpec.group_id
    • RemoteBridgeSpec.idx
    • RemoteBridgeSpec.n_molecules
    • RemoteBridgeSpec.to_dict()
    • RemoteBridgeSpec.unixsocket
  • SocketHub
    • SocketHub.__init__()
    • SocketHub.all_bound()
    • SocketHub.graceful_shutdown()
    • SocketHub.register_molecule()
    • SocketHub.register_molecule_return_id()
    • SocketHub.step_barrier()
    • SocketHub.stop()
    • SocketHub.wait_until_bound()
  • SusceptibilitySocketHub
    • SusceptibilitySocketHub.__init__()
    • SusceptibilitySocketHub.lorentzian_conversion()
    • SusceptibilitySocketHub.rank_stats
    • SusceptibilitySocketHub.stop()
  • am_master()
  • get_available_host_port()
  • mpi_bcast_from_master()
  • run_bridge_node()
  • Submodules
    • maxwelllink.sockets.aggregated module
      • AggregatedBridge
      • AggregatedSocketHub
      • LocalSocketHubBridge
      • RemoteBridgeSpec
      • mxl_bridge_main()
      • run_bridge_node()
    • maxwelllink.sockets.aggregated_susceptibility module
      • AggregatedSusceptibilitySocketHub
    • maxwelllink.sockets.protocol module
    • maxwelllink.sockets.sockets module
      • DummySocketHub
      • SocketHub
      • am_master()
      • get_available_host_port()
      • mpi_bcast_from_master()
    • maxwelllink.sockets.susceptibility module
      • SusceptibilitySocketHub
• maxwelllink.tools package
  • calc_transverse_components_3d()
  • cosine_drive()
  • gaussian_enveloped_cosine()
  • gaussian_pulse()
  • ir_spectrum()
  • k_parallel_pulse()
  • k_parallel_pulse_with_seed()
  • lr_tddft_spectrum()
  • project_transverse_field_3d()
  • rt_tddft_spectrum()
  • Submodules
    • maxwelllink.tools.harmonic_oscillator_helper module
      • DummyInitializer
      • DummyThermostat
      • LangevinThermostat
      • MaxwellBoltzmannInitializer
    • maxwelllink.tools.ir module
      • auto_correlation_function()
      • fft()
      • ir_spectrum()
      • smooth()
    • maxwelllink.tools.plotting module
      • draw_molecules()
      • draw_optical_planes()
      • plot_cavity()
      • plot_cavity_1d()
      • plot_cavity_2d()
      • polish_axes()
      • use_style()
    • maxwelllink.tools.pulses module
      • cosine_drive()
      • gaussian_enveloped_cosine()
      • gaussian_pulse()
      • k_parallel_pulse()
      • k_parallel_pulse_with_seed()
    • maxwelllink.tools.tddft_spectrum module
      • lr_tddft_spectrum()
      • rt_tddft_spectrum()
    • maxwelllink.tools.transverse_components module
      • calc_transverse_components_3d()
      • calc_transverse_components_cylindrical()
      • project_transverse_field_3d()

Submodules

• maxwelllink.units module
  • unit()
  • wavelength_nm_from_omega()